Check the validity of conda environment's components — checkCondaBin • SeuratIntegrate

Check the validity of conda environment's components. Best used on a CondaEnv object. Internally call:

checkCondaBin: conda_binary
checkCondaEnvPath: condaenv_exists
checkCondaEnvName: condaenv_exists
checkCondaEnv: both

Usage

checkCondaBin(x, ..., verbose = getOption("verbose"))

checkCondaEnvPath(x, ..., verbose = getOption("verbose"))

checkCondaEnvName(x, ..., verbose = getOption("verbose"))

checkCondaEnv(x, ..., verbose = getOption("verbose"))

Arguments

x: a CondaEnv object or a sub element of it of class CondaEnvSlot. checkCondaEnv() only accepts a CondaEnv object
...: ignored when x is a CondaEnv object. Otherwise, additional arguments to reticulate functions in Description such as conda = ...
verbose: ignored

Value

an updated object of same class as input x

Note

checkCondaEnv is a wrapper that calls all checks.

See also

isValid(), CondaEnv